Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm22133-201ENSMUST00000102082 109 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm12314-201ENSMUST00000118104 538 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm13315-201ENSMUST00000120376 991 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm8531-201ENSMUST00000188319 893 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm13019-201ENSMUST00000120000 276 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm12291-201ENSMUST00000121627 311 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm21092-201ENSMUST00000178995 955 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vps13aQ5H8C4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Gm14724-201ENSMUST00000118400 537 ntBASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Gm9507-202ENSMUST00000180157 654 ntBASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Gm42433-201ENSMUST00000196806 940 ntBASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.4□□□□□ -0.42
Vps13aQ5H8C4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vps13aQ5H8C4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vps13aQ5H8C4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vps13aQ5H8C4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Gm6905-201ENSMUST00000205729 511 ntBASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Gm15352-201ENSMUST00000118696 270 ntBASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Gm24844-201ENSMUST00000158679 127 ntBASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Gm7985-201ENSMUST00000183329 981 ntBASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Vps13aQ5H8C4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps13aQ5H8C4 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms