Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf20Q5DTM8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.33■□□□□ 0.05
Rnf20Q5DTM8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rnf20Q5DTM8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Rnf20Q5DTM8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Gm13369-201ENSMUST00000119442 987 ntBASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Gm26185-201ENSMUST00000157692 266 ntBASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rnf20Q5DTM8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm16479-201ENSMUST00000121706 932 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm22331-201ENSMUST00000158066 136 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm27847-201ENSMUST00000183711 107 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm27375-201ENSMUST00000183799 107 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm7653-201ENSMUST00000214567 508 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm5035-201ENSMUST00000215581 927 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf20Q5DTM8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Gm24644-201ENSMUST00000157114 139 ntBASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Gm27839-201ENSMUST00000184242 106 ntBASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.31■□□□□ 0.04
Rnf20Q5DTM8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms