Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim80Q3V061 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim80Q3V061 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Gm15678-201ENSMUST00000117573 960 ntBASIC13.34□□□□□ -0.27
Trim80Q3V061 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Mir6392-201ENSMUST00000184924 108 ntBASIC13.34□□□□□ -0.27
Trim80Q3V061 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.34□□□□□ -0.27
Trim80Q3V061 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim80Q3V061 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.34□□□□□ -0.27
Trim80Q3V061 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.34□□□□□ -0.27
Trim80Q3V061 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim80Q3V061 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim80Q3V061 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim80Q3V061 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.33□□□□□ -0.28
Trim80Q3V061 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trim80Q3V061 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Gm17150-201ENSMUST00000165577 381 ntBASIC13.33□□□□□ -0.28
Trim80Q3V061 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.33□□□□□ -0.28
Trim80Q3V061 Gm6266-201ENSMUST00000203844 806 ntBASIC13.33□□□□□ -0.28
Trim80Q3V061 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.33□□□□□ -0.28
Trim80Q3V061 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Gm9899-201ENSMUST00000065519 555 ntBASIC13.33□□□□□ -0.28
Trim80Q3V061 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim80Q3V061 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim80Q3V061 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.32□□□□□ -0.28
Trim80Q3V061 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim80Q3V061 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.32□□□□□ -0.28
Trim80Q3V061 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Mir1938-201ENSMUST00000158746 100 ntBASIC13.32□□□□□ -0.28
Trim80Q3V061 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim80Q3V061 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trim80Q3V061 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.32□□□□□ -0.28
Trim80Q3V061 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms