Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Gm21854-201ENSMUST00000179901 471 ntBASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Gm26315-201ENSMUST00000083890 321 ntBASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.66□□□□□ -0.22
Trim43aQ3TL54 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Gm22189-201ENSMUST00000103822 86 ntBASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Daam2-202ENSMUST00000224595 1926 ntBASIC13.66□□□□□ -0.22
Trim43aQ3TL54 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim43aQ3TL54 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Gm11978-201ENSMUST00000122315 466 ntBASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Gm42550-201ENSMUST00000201553 960 ntBASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Gm19220-201ENSMUST00000222682 803 ntBASIC13.65□□□□□ -0.22
Trim43aQ3TL54 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43aQ3TL54 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms