Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd8Q09XV5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm12986-201ENSMUST00000119037 967 ntBASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm12453-201ENSMUST00000121981 331 ntBASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.43□□□□□ -0.58
Chd8Q09XV5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm18514-201ENSMUST00000218980 436 ntBASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.43□□□□□ -0.58
Chd8Q09XV5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.43□□□□□ -0.58
Chd8Q09XV5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm28882-201ENSMUST00000185504 314 ntBASIC11.43□□□□□ -0.58
Chd8Q09XV5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.43□□□□□ -0.58
Chd8Q09XV5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.43□□□□□ -0.58
Chd8Q09XV5 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd8Q09XV5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gm22920-201ENSMUST00000102175 109 ntBASIC11.42□□□□□ -0.58
Chd8Q09XV5 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gm6331-201ENSMUST00000217890 450 ntBASIC11.42□□□□□ -0.58
Chd8Q09XV5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.42□□□□□ -0.58
Chd8Q09XV5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.42□□□□□ -0.58
Chd8Q09XV5 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.42□□□□□ -0.58
Chd8Q09XV5 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.42□□□□□ -0.58
Chd8Q09XV5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd8Q09XV5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms