Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC12.79□□□□□ -0.36
Col9a1Q05722 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col9a1Q05722 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm9506-201ENSMUST00000118516 320 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm12337-201ENSMUST00000119634 400 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm14417-201ENSMUST00000120036 1074 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm7722-201ENSMUST00000120646 741 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm6182-201ENSMUST00000156439 1208 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm16147-201ENSMUST00000162143 373 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm8451-201ENSMUST00000170338 447 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC12.78□□□□□ -0.36
Col9a1Q05722 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm7536-201ENSMUST00000077389 444 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Gm5453-201ENSMUST00000080866 447 ntBASIC12.78□□□□□ -0.36
Col9a1Q05722 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col9a1Q05722 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col9a1Q05722 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col9a1Q05722 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col9a1Q05722 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Col9a1Q05722 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col9a1Q05722 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col9a1Q05722 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col9a1Q05722 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col9a1Q05722 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col9a1Q05722 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col9a1Q05722 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col9a1Q05722 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.77□□□□□ -0.37
Col9a1Q05722 Gm23255-201ENSMUST00000102244 110 ntBASIC12.77□□□□□ -0.37
Col9a1Q05722 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col9a1Q05722 Mir669l-201ENSMUST00000103771 98 ntBASIC12.77□□□□□ -0.37
Col9a1Q05722 Gm13924-201ENSMUST00000119899 486 ntBASIC12.77□□□□□ -0.37
Col9a1Q05722 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC12.77□□□□□ -0.37
Col9a1Q05722 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col9a1Q05722 Gm26368-201ENSMUST00000157826 118 ntBASIC12.77□□□□□ -0.37
Col9a1Q05722 Gm25998-201ENSMUST00000175397 53 ntBASIC12.77□□□□□ -0.37
Col9a1Q05722 Gm27910-201ENSMUST00000185004 107 ntBASIC12.77□□□□□ -0.37
Col9a1Q05722 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC12.77□□□□□ -0.37
Col9a1Q05722 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col9a1Q05722 Gm18059-201ENSMUST00000208073 580 ntBASIC12.77□□□□□ -0.37
Col9a1Q05722 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col9a1Q05722 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col9a1Q05722 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col9a1Q05722 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col9a1Q05722 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col9a1Q05722 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.77□□□□□ -0.37
Col9a1Q05722 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms