Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pfdn6Q03958 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.96□□□□□ -0.33
Pfdn6Q03958 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.96□□□□□ -0.33
Pfdn6Q03958 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.96□□□□□ -0.33
Pfdn6Q03958 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.96□□□□□ -0.33
Pfdn6Q03958 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.96□□□□□ -0.33
Pfdn6Q03958 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.96□□□□□ -0.33
Pfdn6Q03958 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm8463-201ENSMUST00000208573 613 ntBASIC12.96□□□□□ -0.33
Pfdn6Q03958 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Gm6180-201ENSMUST00000065243 498 ntBASIC12.96□□□□□ -0.33
Pfdn6Q03958 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pfdn6Q03958 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Pfdn6Q03958 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pfdn6Q03958 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.95□□□□□ -0.34
Pfdn6Q03958 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Gm13612-201ENSMUST00000119276 390 ntBASIC12.95□□□□□ -0.34
Pfdn6Q03958 Gm14928-201ENSMUST00000120198 477 ntBASIC12.95□□□□□ -0.34
Pfdn6Q03958 Gm11978-201ENSMUST00000122315 466 ntBASIC12.95□□□□□ -0.34
Pfdn6Q03958 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Gm6745-201ENSMUST00000199216 526 ntBASIC12.95□□□□□ -0.34
Pfdn6Q03958 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.95□□□□□ -0.34
Pfdn6Q03958 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Gm7287-201ENSMUST00000205267 602 ntBASIC12.95□□□□□ -0.34
Pfdn6Q03958 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.95□□□□□ -0.34
Pfdn6Q03958 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.95□□□□□ -0.34
Pfdn6Q03958 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pfdn6Q03958 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pfdn6Q03958 Pck2-205ENSMUST00000226352 2784 ntBASIC12.95□□□□□ -0.34
Pfdn6Q03958 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms