Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smarcc1P97496 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Smarcc1P97496 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.07■□□□□ 0.16
Smarcc1P97496 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.07■□□□□ 0.16
Smarcc1P97496 Gm9062-201ENSMUST00000117712 727 ntBASIC16.07■□□□□ 0.16
Smarcc1P97496 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.07■□□□□ 0.16
Smarcc1P97496 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.07■□□□□ 0.16
Smarcc1P97496 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.07■□□□□ 0.16
Smarcc1P97496 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.07■□□□□ 0.16
Smarcc1P97496 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Smarcc1P97496 Gm37666-201ENSMUST00000194110 866 ntBASIC16.07■□□□□ 0.16
Smarcc1P97496 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.07■□□□□ 0.16
Smarcc1P97496 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.07■□□□□ 0.16
Smarcc1P97496 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.07■□□□□ 0.16
Smarcc1P97496 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.07■□□□□ 0.16
Smarcc1P97496 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Mir339-201ENSMUST00000083659 96 ntBASIC16.07■□□□□ 0.16
Smarcc1P97496 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.07■□□□□ 0.16
Smarcc1P97496 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smarcc1P97496 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Smarcc1P97496 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc1P97496 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Smarcc1P97496 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
Smarcc1P97496 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smarcc1P97496 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Gm12015-201ENSMUST00000117065 843 ntBASIC16.06■□□□□ 0.16
Smarcc1P97496 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.06■□□□□ 0.16
Smarcc1P97496 Gm14921-201ENSMUST00000118643 908 ntBASIC16.06■□□□□ 0.16
Smarcc1P97496 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smarcc1P97496 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.06■□□□□ 0.16
Smarcc1P97496 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarcc1P97496 Gm18734-201ENSMUST00000172937 808 ntBASIC16.06■□□□□ 0.16
Smarcc1P97496 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.06■□□□□ 0.16
Smarcc1P97496 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.06■□□□□ 0.16
Smarcc1P97496 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarcc1P97496 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc1P97496 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc1P97496 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc1P97496 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smarcc1P97496 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.05■□□□□ 0.16
Smarcc1P97496 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc1P97496 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc1P97496 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.05■□□□□ 0.16
Smarcc1P97496 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc1P97496 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc1P97496 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc1P97496 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Smarcc1P97496 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc1P97496 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.05■□□□□ 0.16
Smarcc1P97496 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.05■□□□□ 0.16
Smarcc1P97496 Gm9555-201ENSMUST00000200908 583 ntBASIC16.05■□□□□ 0.16
Smarcc1P97496 Gm5051-201ENSMUST00000204085 485 ntBASIC16.05■□□□□ 0.16
Smarcc1P97496 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc1P97496 Gm45598-202ENSMUST00000210719 986 ntBASIC16.05■□□□□ 0.16
Smarcc1P97496 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.05■□□□□ 0.16
Smarcc1P97496 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms