Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC8.48□□□□□ -1.05
PrkdcP97313 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
PrkdcP97313 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 AC154725.1-201ENSMUST00000224826 1961 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
PrkdcP97313 Gm15620-201ENSMUST00000122949 270 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC8.48□□□□□ -1.05
PrkdcP97313 Gm19931-201ENSMUST00000198920 368 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
PrkdcP97313 CT009536.2-201ENSMUST00000225370 665 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 AC142266.1-201ENSMUST00000228107 415 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
PrkdcP97313 Gm21451-201ENSMUST00000111062 2775 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Gm4900-201ENSMUST00000222046 1628 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
PrkdcP97313 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
PrkdcP97313 Gm26875-201ENSMUST00000181006 950 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 Gm45758-201ENSMUST00000212448 1006 ntBASIC8.48□□□□□ -1.05
PrkdcP97313 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PrkdcP97313 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
PrkdcP97313 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC8.47□□□□□ -1.05
PrkdcP97313 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 AC159810.1-201ENSMUST00000214838 1480 ntBASIC8.47□□□□□ -1.05
PrkdcP97313 Gm13700-201ENSMUST00000118624 1128 ntBASIC8.47□□□□□ -1.05
PrkdcP97313 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Gm28833-201ENSMUST00000189671 559 ntBASIC8.47□□□□□ -1.05
PrkdcP97313 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 AC187103.3-201ENSMUST00000225725 646 ntBASIC8.47□□□□□ -1.05
PrkdcP97313 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Gm21759-201ENSMUST00000178345 1828 ntBASIC8.47□□□□□ -1.05
PrkdcP97313 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
PrkdcP97313 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 AC107763.1-201ENSMUST00000226082 1365 ntBASIC8.47□□□□□ -1.05
PrkdcP97313 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Gm11500-201ENSMUST00000118237 601 ntBASIC8.47□□□□□ -1.05
PrkdcP97313 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 AC137950.2-202ENSMUST00000227150 1635 ntBASIC8.47□□□□□ -1.05
PrkdcP97313 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
PrkdcP97313 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PrkdcP97313 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
PrkdcP97313 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
PrkdcP97313 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC8.46□□□□□ -1.05
PrkdcP97313 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PrkdcP97313 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
PrkdcP97313 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
PrkdcP97313 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
PrkdcP97313 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC8.46□□□□□ -1.05
PrkdcP97313 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
PrkdcP97313 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms