Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.51□□□□□ -0.57
SgcbP82349 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.5□□□□□ -0.57
SgcbP82349 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
SgcbP82349 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SgcbP82349 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
SgcbP82349 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.5□□□□□ -0.57
SgcbP82349 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.5□□□□□ -0.57
SgcbP82349 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.5□□□□□ -0.57
SgcbP82349 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
SgcbP82349 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
SgcbP82349 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgcbP82349 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SgcbP82349 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
SgcbP82349 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
SgcbP82349 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.49□□□□□ -0.57
SgcbP82349 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.49□□□□□ -0.57
SgcbP82349 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.49□□□□□ -0.57
SgcbP82349 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SgcbP82349 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Gm17420-201ENSMUST00000164753 153 ntBASIC11.49□□□□□ -0.57
SgcbP82349 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.49□□□□□ -0.57
SgcbP82349 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.49□□□□□ -0.57
SgcbP82349 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.49□□□□□ -0.57
SgcbP82349 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.49□□□□□ -0.57
SgcbP82349 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.49□□□□□ -0.57
SgcbP82349 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SgcbP82349 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SgcbP82349 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.49□□□□□ -0.57
SgcbP82349 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.49□□□□□ -0.57
SgcbP82349 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SgcbP82349 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SgcbP82349 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.49□□□□□ -0.57
SgcbP82349 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.49□□□□□ -0.57
SgcbP82349 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SgcbP82349 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcbP82349 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
SgcbP82349 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.48□□□□□ -0.57
SgcbP82349 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.48□□□□□ -0.57
SgcbP82349 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcbP82349 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms