Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Otx1P80205 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.12□□□□□ -0.63
Otx1P80205 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Otx1P80205 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Otx1P80205 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.12□□□□□ -0.63
Otx1P80205 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Otx1P80205 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Otx1P80205 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Otx1P80205 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Gm14921-201ENSMUST00000118643 908 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.11□□□□□ -0.63
Otx1P80205 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Gm22121-201ENSMUST00000175148 54 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Gm27847-201ENSMUST00000183711 107 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Gm27375-201ENSMUST00000183799 107 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Mir6420-201ENSMUST00000185032 102 ntBASIC11.11□□□□□ -0.63
Otx1P80205 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Gm37042-201ENSMUST00000193816 581 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.11□□□□□ -0.63
Otx1P80205 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.11□□□□□ -0.63
Otx1P80205 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Otx1P80205 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.11□□□□□ -0.63
Otx1P80205 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.1□□□□□ -0.63
Otx1P80205 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.1□□□□□ -0.63
Otx1P80205 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Otx1P80205 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Otx1P80205 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Otx1P80205 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.1□□□□□ -0.63
Otx1P80205 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Gm12742-201ENSMUST00000117326 410 ntBASIC11.1□□□□□ -0.63
Otx1P80205 Gm13369-201ENSMUST00000119442 987 ntBASIC11.1□□□□□ -0.63
Otx1P80205 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.1□□□□□ -0.63
Otx1P80205 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.1□□□□□ -0.63
Otx1P80205 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.1□□□□□ -0.63
Otx1P80205 Gm29705-201ENSMUST00000212598 474 ntBASIC11.1□□□□□ -0.63
Otx1P80205 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Otx1P80205 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Otx1P80205 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Otx1P80205 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otx1P80205 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.1□□□□□ -0.63
Otx1P80205 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms