Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC20.63■□□□□ 0.89
Cux2P70298 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC20.63■□□□□ 0.89
Cux2P70298 Gm17877-201ENSMUST00000192578 814 ntBASIC20.63■□□□□ 0.89
Cux2P70298 Gm5298-201ENSMUST00000201122 892 ntBASIC20.63■□□□□ 0.89
Cux2P70298 Gm44270-201ENSMUST00000203084 1234 ntBASIC20.63■□□□□ 0.89
Cux2P70298 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC20.63■□□□□ 0.89
Cux2P70298 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC20.63■□□□□ 0.89
Cux2P70298 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC20.63■□□□□ 0.89
Cux2P70298 AC166344.1-201ENSMUST00000223745 674 ntBASIC20.63■□□□□ 0.89
Cux2P70298 Arhgef33-207ENSMUST00000224966 490 ntBASIC20.63■□□□□ 0.89
Cux2P70298 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cux2P70298 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cux2P70298 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cux2P70298 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cux2P70298 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cux2P70298 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cux2P70298 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cux2P70298 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cux2P70298 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cux2P70298 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Cux2P70298 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cux2P70298 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cux2P70298 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cux2P70298 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cux2P70298 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC20.62■□□□□ 0.89
Cux2P70298 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC20.62■□□□□ 0.89
Cux2P70298 Gm7722-201ENSMUST00000120646 741 ntBASIC20.62■□□□□ 0.89
Cux2P70298 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC20.62■□□□□ 0.89
Cux2P70298 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Gm45575-201ENSMUST00000210283 548 ntBASIC20.62■□□□□ 0.89
Cux2P70298 Gm9797-202ENSMUST00000218003 294 ntBASIC20.62■□□□□ 0.89
Cux2P70298 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cux2P70298 Gm15459-201ENSMUST00000117405 1941 ntBASIC20.62■□□□□ 0.89
Cux2P70298 Gm8355-201ENSMUST00000177767 1941 ntBASIC20.62■□□□□ 0.89
Cux2P70298 Gm14752-201ENSMUST00000120719 2075 ntBASIC20.62■□□□□ 0.89
Cux2P70298 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Cux2P70298 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cux2P70298 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC20.61■□□□□ 0.89
Cux2P70298 Gm22711-201ENSMUST00000116890 133 ntBASIC20.61■□□□□ 0.89
Cux2P70298 Gm13549-201ENSMUST00000118339 796 ntBASIC20.61■□□□□ 0.89
Cux2P70298 Gm15566-201ENSMUST00000121130 590 ntBASIC20.61■□□□□ 0.89
Cux2P70298 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC20.61■□□□□ 0.89
Cux2P70298 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cux2P70298 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC20.61■□□□□ 0.89
Cux2P70298 Gm43778-201ENSMUST00000199438 199 ntBASIC20.61■□□□□ 0.89
Cux2P70298 Mt1-202ENSMUST00000211807 1085 ntBASIC20.61■□□□□ 0.89
Cux2P70298 AC115122.1-201ENSMUST00000224850 1040 ntBASIC20.61■□□□□ 0.89
Cux2P70298 AC134860.1-201ENSMUST00000224867 660 ntBASIC20.61■□□□□ 0.89
Cux2P70298 AC138604.1-201ENSMUST00000226969 739 ntBASIC20.61■□□□□ 0.89
Cux2P70298 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Cux2P70298 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Gm25076-201ENSMUST00000104098 132 ntBASIC20.61■□□□□ 0.89
Cux2P70298 Gm26013-201ENSMUST00000104404 119 ntBASIC20.61■□□□□ 0.89
Cux2P70298 Gm11663-201ENSMUST00000117888 290 ntBASIC20.61■□□□□ 0.89
Cux2P70298 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC20.61■□□□□ 0.89
Cux2P70298 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cux2P70298 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC20.61■□□□□ 0.89
Cux2P70298 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC20.61■□□□□ 0.89
Cux2P70298 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cux2P70298 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cux2P70298 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cux2P70298 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cux2P70298 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cux2P70298 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Cux2P70298 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cux2P70298 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cux2P70298 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cux2P70298 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cux2P70298 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cux2P70298 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Cux2P70298 Gm4654-201ENSMUST00000183305 982 ntBASIC20.6■□□□□ 0.89
Cux2P70298 Gm8531-201ENSMUST00000188319 893 ntBASIC20.6■□□□□ 0.89
Cux2P70298 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cux2P70298 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cux2P70298 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cux2P70298 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms