Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.76□□□□□ -0.69
Pdlim4P70271 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdlim4P70271 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.75□□□□□ -0.69
Pdlim4P70271 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.75□□□□□ -0.69
Pdlim4P70271 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Gm10156-201ENSMUST00000122364 462 ntBASIC10.75□□□□□ -0.69
Pdlim4P70271 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Gm24196-201ENSMUST00000179161 110 ntBASIC10.75□□□□□ -0.69
Pdlim4P70271 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Gm6458-201ENSMUST00000211573 635 ntBASIC10.75□□□□□ -0.69
Pdlim4P70271 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Gm10012-201ENSMUST00000078252 192 ntBASIC10.75□□□□□ -0.69
Pdlim4P70271 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdlim4P70271 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.75□□□□□ -0.69
Pdlim4P70271 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pdlim4P70271 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pdlim4P70271 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm24644-201ENSMUST00000157114 139 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm22331-201ENSMUST00000158066 136 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm17150-201ENSMUST00000165577 381 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm43433-201ENSMUST00000196573 481 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pdlim4P70271 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.74□□□□□ -0.69
Pdlim4P70271 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm5186-201ENSMUST00000218781 920 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdlim4P70271 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.74□□□□□ -0.69
Pdlim4P70271 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms