Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.2■□□□□ 0.02
Rhbdl3P58873 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Gm13996-201ENSMUST00000118456 430 ntBASIC15.2■□□□□ 0.02
Rhbdl3P58873 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Gm28882-201ENSMUST00000185504 314 ntBASIC15.2■□□□□ 0.02
Rhbdl3P58873 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.2■□□□□ 0.02
Rhbdl3P58873 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rhbdl3P58873 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.19■□□□□ 0.02
Rhbdl3P58873 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Gm12015-201ENSMUST00000117065 843 ntBASIC15.19■□□□□ 0.02
Rhbdl3P58873 Gm7857-201ENSMUST00000117957 358 ntBASIC15.19■□□□□ 0.02
Rhbdl3P58873 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.19■□□□□ 0.02
Rhbdl3P58873 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rhbdl3P58873 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Acot6-202ENSMUST00000222921 3622 ntBASIC15.18■□□□□ 0.02
Rhbdl3P58873 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.18■□□□□ 0.02
Rhbdl3P58873 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gm6963-201ENSMUST00000147879 379 ntBASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Mir5120-201ENSMUST00000175020 78 ntBASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gm42937-201ENSMUST00000197360 752 ntBASIC15.18■□□□□ 0.02
Rhbdl3P58873 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gzmn-202ENSMUST00000225535 989 ntBASIC15.18■□□□□ 0.02
Rhbdl3P58873 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gm10076-201ENSMUST00000073238 384 ntBASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gm10312-201ENSMUST00000078515 489 ntBASIC15.18■□□□□ 0.02
Rhbdl3P58873 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rhbdl3P58873 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rhbdl3P58873 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rhbdl3P58873 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rhbdl3P58873 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rhbdl3P58873 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.17■□□□□ 0.02
Rhbdl3P58873 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rhbdl3P58873 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms