Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.53□□□□□ -0.56
Abcd3P55096 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Abcd3P55096 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Abcd3P55096 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Abcd3P55096 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Gm24196-201ENSMUST00000179161 110 ntBASIC11.53□□□□□ -0.56
Abcd3P55096 Gm18187-201ENSMUST00000196476 984 ntBASIC11.53□□□□□ -0.56
Abcd3P55096 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.53□□□□□ -0.56
Abcd3P55096 Gm17794-201ENSMUST00000220252 955 ntBASIC11.53□□□□□ -0.56
Abcd3P55096 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.53□□□□□ -0.56
Abcd3P55096 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Abcd3P55096 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Abcd3P55096 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.53□□□□□ -0.56
Abcd3P55096 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Abcd3P55096 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Abcd3P55096 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Abcd3P55096 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abcd3P55096 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Gm8805-201ENSMUST00000117848 313 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 Gm14704-201ENSMUST00000120300 874 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.52□□□□□ -0.57
Abcd3P55096 Gm9002-201ENSMUST00000178437 499 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Gm43433-201ENSMUST00000196573 481 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Abcd3P55096 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Abcd3P55096 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.52□□□□□ -0.57
Abcd3P55096 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Abcd3P55096 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.52□□□□□ -0.57
Abcd3P55096 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abcd3P55096 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Abcd3P55096 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Abcd3P55096 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.51□□□□□ -0.57
Abcd3P55096 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.51□□□□□ -0.57
Abcd3P55096 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Abcd3P55096 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Abcd3P55096 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abcd3P55096 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms