Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.22■□□□□ 0.19
Msh6P54276 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.22■□□□□ 0.19
Msh6P54276 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Msh6P54276 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Msh6P54276 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.21■□□□□ 0.19
Msh6P54276 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Msh6P54276 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.21■□□□□ 0.19
Msh6P54276 Gm27552-201ENSMUST00000183351 62 ntBASIC16.21■□□□□ 0.19
Msh6P54276 Gm27844-201ENSMUST00000183613 62 ntBASIC16.21■□□□□ 0.19
Msh6P54276 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.21■□□□□ 0.19
Msh6P54276 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.21■□□□□ 0.19
Msh6P54276 Gm37201-201ENSMUST00000191845 523 ntBASIC16.21■□□□□ 0.19
Msh6P54276 Gm37835-201ENSMUST00000193305 361 ntBASIC16.21■□□□□ 0.19
Msh6P54276 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.21■□□□□ 0.19
Msh6P54276 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.21■□□□□ 0.19
Msh6P54276 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Msh6P54276 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Msh6P54276 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Msh6P54276 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.21■□□□□ 0.18
Msh6P54276 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Msh6P54276 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Msh6P54276 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Msh6P54276 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Msh6P54276 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Msh6P54276 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Gm15703-201ENSMUST00000120250 880 ntBASIC16.2■□□□□ 0.18
Msh6P54276 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.2■□□□□ 0.18
Msh6P54276 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.2■□□□□ 0.18
Msh6P54276 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.2■□□□□ 0.18
Msh6P54276 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.2■□□□□ 0.18
Msh6P54276 Gm44651-201ENSMUST00000207343 372 ntBASIC16.2■□□□□ 0.18
Msh6P54276 Gm45925-201ENSMUST00000218882 744 ntBASIC16.2■□□□□ 0.18
Msh6P54276 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Msh6P54276 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Msh6P54276 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.2■□□□□ 0.18
Msh6P54276 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Msh6P54276 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Msh6P54276 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Msh6P54276 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Msh6P54276 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC16.19■□□□□ 0.18
Msh6P54276 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Gm24845-201ENSMUST00000158034 109 ntBASIC16.19■□□□□ 0.18
Msh6P54276 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Msh6P54276 Rprl1-202ENSMUST00000198476 238 ntBASIC16.19■□□□□ 0.18
Msh6P54276 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.19■□□□□ 0.18
Msh6P54276 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.19■□□□□ 0.18
Msh6P54276 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Msh6P54276 AC167013.1-201ENSMUST00000228592 202 ntBASIC16.19■□□□□ 0.18
Msh6P54276 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Msh6P54276 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Msh6P54276 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms