Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.3■□□□□ 0.04
Ercc3P49135 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.3■□□□□ 0.04
Ercc3P49135 Gm19163-201ENSMUST00000223313 780 ntBASIC15.3■□□□□ 0.04
Ercc3P49135 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Gm9823-201ENSMUST00000051212 327 ntBASIC15.3■□□□□ 0.04
Ercc3P49135 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ercc3P49135 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ercc3P49135 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc3P49135 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.29■□□□□ 0.04
Ercc3P49135 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ercc3P49135 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.29■□□□□ 0.04
Ercc3P49135 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.29■□□□□ 0.04
Ercc3P49135 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.29■□□□□ 0.04
Ercc3P49135 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Ercc3P49135 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.29■□□□□ 0.04
Ercc3P49135 Gm2231-201ENSMUST00000125661 612 ntBASIC15.29■□□□□ 0.04
Ercc3P49135 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.29■□□□□ 0.04
Ercc3P49135 Gm37424-201ENSMUST00000191727 561 ntBASIC15.29■□□□□ 0.04
Ercc3P49135 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.29■□□□□ 0.04
Ercc3P49135 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.29■□□□□ 0.04
Ercc3P49135 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ercc3P49135 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc3P49135 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ercc3P49135 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ercc3P49135 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ercc3P49135 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Snord83b-201ENSMUST00000104546 94 ntBASIC15.28■□□□□ 0.04
Ercc3P49135 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ercc3P49135 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.28■□□□□ 0.04
Ercc3P49135 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ercc3P49135 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Ercc3P49135 Gm25261-201ENSMUST00000157416 134 ntBASIC15.28■□□□□ 0.04
Ercc3P49135 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Gm32025-201ENSMUST00000217960 307 ntBASIC15.28■□□□□ 0.04
Ercc3P49135 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ercc3P49135 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ercc3P49135 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.28■□□□□ 0.04
Ercc3P49135 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ercc3P49135 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ercc3P49135 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ercc3P49135 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.27■□□□□ 0.04
Ercc3P49135 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ercc3P49135 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ercc3P49135 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Gm5187-201ENSMUST00000117317 991 ntBASIC15.27■□□□□ 0.04
Ercc3P49135 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.27■□□□□ 0.04
Ercc3P49135 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Gm27572-201ENSMUST00000183702 255 ntBASIC15.27■□□□□ 0.04
Ercc3P49135 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.27■□□□□ 0.04
Ercc3P49135 Gm37042-201ENSMUST00000193816 581 ntBASIC15.27■□□□□ 0.04
Ercc3P49135 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.27■□□□□ 0.04
Ercc3P49135 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.27■□□□□ 0.04
Ercc3P49135 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ercc3P49135 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.27■□□□□ 0.03
Ercc3P49135 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc3P49135 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc3P49135 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc3P49135 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc3P49135 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc3P49135 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.27■□□□□ 0.03
Ercc3P49135 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ercc3P49135 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ercc3P49135 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms