Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Prox1P48437 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.38□□□□□ -0.43
Prox1P48437 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Prox1P48437 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.38□□□□□ -0.43
Prox1P48437 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.38□□□□□ -0.43
Prox1P48437 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.38□□□□□ -0.43
Prox1P48437 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Prox1P48437 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.38□□□□□ -0.43
Prox1P48437 Gm4875-201ENSMUST00000118257 786 ntBASIC12.38□□□□□ -0.43
Prox1P48437 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.38□□□□□ -0.43
Prox1P48437 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.38□□□□□ -0.43
Prox1P48437 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.38□□□□□ -0.43
Prox1P48437 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Prox1P48437 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.38□□□□□ -0.43
Prox1P48437 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prox1P48437 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.38□□□□□ -0.43
Prox1P48437 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.37□□□□□ -0.43
Prox1P48437 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.37□□□□□ -0.43
Prox1P48437 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Daam2-202ENSMUST00000224595 1926 ntBASIC12.37□□□□□ -0.43
Prox1P48437 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Prox1P48437 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.37□□□□□ -0.43
Prox1P48437 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.37□□□□□ -0.43
Prox1P48437 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.37□□□□□ -0.43
Prox1P48437 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Prox1P48437 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Prox1P48437 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Prox1P48437 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Prox1P48437 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.37□□□□□ -0.43
Prox1P48437 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Prox1P48437 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prox1P48437 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.36□□□□□ -0.43
Prox1P48437 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Prox1P48437 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.36□□□□□ -0.43
Prox1P48437 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prox1P48437 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms