Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf4P43488 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.43□□□□□ -0.42
Tnfsf4P43488 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf4P43488 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.43□□□□□ -0.42
Tnfsf4P43488 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.43□□□□□ -0.42
Tnfsf4P43488 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf4P43488 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gm14057-201ENSMUST00000120631 482 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Mir7654-201ENSMUST00000185082 70 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gm44855-201ENSMUST00000205725 362 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gm6458-201ENSMUST00000211573 635 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.42□□□□□ -0.42
Tnfsf4P43488 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf4P43488 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.41□□□□□ -0.42
Tnfsf4P43488 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.41□□□□□ -0.42
Tnfsf4P43488 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.41□□□□□ -0.42
Tnfsf4P43488 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.41□□□□□ -0.42
Tnfsf4P43488 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms