Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HmgclP38060 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HmgclP38060 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HmgclP38060 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HmgclP38060 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HmgclP38060 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HmgclP38060 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HmgclP38060 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HmgclP38060 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
HmgclP38060 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HmgclP38060 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Gm1335-201ENSMUST00000121653 386 ntBASIC12.69□□□□□ -0.38
HmgclP38060 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.69□□□□□ -0.38
HmgclP38060 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.69□□□□□ -0.38
HmgclP38060 Gm32025-201ENSMUST00000217960 307 ntBASIC12.69□□□□□ -0.38
HmgclP38060 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.69□□□□□ -0.38
HmgclP38060 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.69□□□□□ -0.38
HmgclP38060 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.69□□□□□ -0.38
HmgclP38060 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.69□□□□□ -0.38
HmgclP38060 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HmgclP38060 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HmgclP38060 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.68□□□□□ -0.38
HmgclP38060 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.68□□□□□ -0.38
HmgclP38060 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.68□□□□□ -0.38
HmgclP38060 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.68□□□□□ -0.38
HmgclP38060 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.68□□□□□ -0.38
HmgclP38060 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.68□□□□□ -0.38
HmgclP38060 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HmgclP38060 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.68□□□□□ -0.38
HmgclP38060 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.68□□□□□ -0.38
HmgclP38060 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.68□□□□□ -0.38
HmgclP38060 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.68□□□□□ -0.38
HmgclP38060 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.68□□□□□ -0.38
HmgclP38060 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HmgclP38060 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.68□□□□□ -0.38
HmgclP38060 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.68□□□□□ -0.38
HmgclP38060 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HmgclP38060 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.67□□□□□ -0.38
HmgclP38060 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.67□□□□□ -0.38
HmgclP38060 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HmgclP38060 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms