Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Slc6a1P31648 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Gm12428-201ENSMUST00000119844 727 ntBASIC11.09□□□□□ -0.63
Slc6a1P31648 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.09□□□□□ -0.63
Slc6a1P31648 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Gm19931-201ENSMUST00000198920 368 ntBASIC11.09□□□□□ -0.63
Slc6a1P31648 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Gm9063-201ENSMUST00000223299 582 ntBASIC11.09□□□□□ -0.63
Slc6a1P31648 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.09□□□□□ -0.63
Slc6a1P31648 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Gm5866-201ENSMUST00000177881 973 ntBASIC11.08□□□□□ -0.64
Slc6a1P31648 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Gm45453-201ENSMUST00000211758 853 ntBASIC11.08□□□□□ -0.64
Slc6a1P31648 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.08□□□□□ -0.64
Slc6a1P31648 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.08□□□□□ -0.64
Slc6a1P31648 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.08□□□□□ -0.64
Slc6a1P31648 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Slc6a1P31648 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Slc6a1P31648 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.07□□□□□ -0.64
Slc6a1P31648 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.07□□□□□ -0.64
Slc6a1P31648 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc6a1P31648 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms