Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nedd8P29595 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Nedd8P29595 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nedd8P29595 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Cog3-203ENSMUST00000227473 4197 ntBASIC11.86□□□□□ -0.51
Nedd8P29595 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.86□□□□□ -0.51
Nedd8P29595 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nedd8P29595 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.86□□□□□ -0.51
Nedd8P29595 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nedd8P29595 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nedd8P29595 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.86□□□□□ -0.51
Nedd8P29595 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.86□□□□□ -0.51
Nedd8P29595 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.86□□□□□ -0.51
Nedd8P29595 Gm21470-201ENSMUST00000187680 696 ntBASIC11.86□□□□□ -0.51
Nedd8P29595 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.86□□□□□ -0.51
Nedd8P29595 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nedd8P29595 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.86□□□□□ -0.51
Nedd8P29595 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Nedd8P29595 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.86□□□□□ -0.51
Nedd8P29595 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nedd8P29595 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Nedd8P29595 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Nedd8P29595 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Nedd8P29595 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nedd8P29595 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nedd8P29595 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nedd8P29595 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nedd8P29595 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.85□□□□□ -0.51
Nedd8P29595 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Nedd8P29595 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.85□□□□□ -0.51
Nedd8P29595 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Nedd8P29595 Gm6912-201ENSMUST00000117218 544 ntBASIC11.85□□□□□ -0.51
Nedd8P29595 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.85□□□□□ -0.51
Nedd8P29595 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.85□□□□□ -0.51
Nedd8P29595 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Gm25948-201ENSMUST00000175334 112 ntBASIC11.85□□□□□ -0.51
Nedd8P29595 Gm33320-201ENSMUST00000192232 530 ntBASIC11.85□□□□□ -0.51
Nedd8P29595 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.85□□□□□ -0.51
Nedd8P29595 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.85□□□□□ -0.51
Nedd8P29595 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.85□□□□□ -0.51
Nedd8P29595 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nedd8P29595 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms