Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Vcam1P29533 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcam1P29533 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcam1P29533 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.75□□□□□ -0.05
Vcam1P29533 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.75□□□□□ -0.05
Vcam1P29533 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Acot6-202ENSMUST00000222921 3622 ntBASIC14.74□□□□□ -0.05
Vcam1P29533 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.74□□□□□ -0.05
Vcam1P29533 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.74□□□□□ -0.05
Vcam1P29533 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.74□□□□□ -0.05
Vcam1P29533 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.74□□□□□ -0.05
Vcam1P29533 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.74□□□□□ -0.05
Vcam1P29533 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Gm28882-201ENSMUST00000185504 314 ntBASIC14.74□□□□□ -0.05
Vcam1P29533 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.74□□□□□ -0.05
Vcam1P29533 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.74□□□□□ -0.05
Vcam1P29533 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.74□□□□□ -0.05
Vcam1P29533 Gzmn-202ENSMUST00000225535 989 ntBASIC14.74□□□□□ -0.05
Vcam1P29533 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Vcam1P29533 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vcam1P29533 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Vcam1P29533 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcam1P29533 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Vcam1P29533 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Vcam1P29533 Gm7857-201ENSMUST00000117957 358 ntBASIC14.73□□□□□ -0.05
Vcam1P29533 Gm4909-201ENSMUST00000118749 794 ntBASIC14.73□□□□□ -0.05
Vcam1P29533 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.73□□□□□ -0.05
Vcam1P29533 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.73□□□□□ -0.05
Vcam1P29533 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Gm10076-201ENSMUST00000073238 384 ntBASIC14.73□□□□□ -0.05
Vcam1P29533 Gm10312-201ENSMUST00000078515 489 ntBASIC14.73□□□□□ -0.05
Vcam1P29533 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vcam1P29533 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.73□□□□□ -0.05
Vcam1P29533 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vcam1P29533 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcam1P29533 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.73□□□□□ -0.05
Vcam1P29533 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vcam1P29533 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Vcam1P29533 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Vcam1P29533 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Vcam1P29533 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.72□□□□□ -0.05
Vcam1P29533 Gm12015-201ENSMUST00000117065 843 ntBASIC14.72□□□□□ -0.05
Vcam1P29533 Gm13996-201ENSMUST00000118456 430 ntBASIC14.72□□□□□ -0.05
Vcam1P29533 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.72□□□□□ -0.05
Vcam1P29533 Gm6963-201ENSMUST00000147879 379 ntBASIC14.72□□□□□ -0.05
Vcam1P29533 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Vcam1P29533 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.72□□□□□ -0.05
Vcam1P29533 Gm42937-201ENSMUST00000197360 752 ntBASIC14.72□□□□□ -0.05
Vcam1P29533 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.72□□□□□ -0.05
Vcam1P29533 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.72□□□□□ -0.05
Vcam1P29533 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.72□□□□□ -0.05
Vcam1P29533 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.72□□□□□ -0.05
Vcam1P29533 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcam1P29533 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Vcam1P29533 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms