Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cd40lgP27548 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Cd40lgP27548 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40lgP27548 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cd40lgP27548 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.93□□□□□ -0.5
Cd40lgP27548 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.92□□□□□ -0.5
Cd40lgP27548 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.92□□□□□ -0.5
Cd40lgP27548 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.92□□□□□ -0.5
Cd40lgP27548 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Gm8213-201ENSMUST00000118191 441 ntBASIC11.92□□□□□ -0.5
Cd40lgP27548 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.92□□□□□ -0.5
Cd40lgP27548 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.92□□□□□ -0.5
Cd40lgP27548 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cd40lgP27548 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.92□□□□□ -0.5
Cd40lgP27548 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40lgP27548 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.91□□□□□ -0.5
Cd40lgP27548 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.91□□□□□ -0.5
Cd40lgP27548 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.91□□□□□ -0.5
Cd40lgP27548 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm24644-201ENSMUST00000157114 139 ntBASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.91□□□□□ -0.5
Cd40lgP27548 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.91□□□□□ -0.5
Cd40lgP27548 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.91□□□□□ -0.5
Cd40lgP27548 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cd40lgP27548 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cd40lgP27548 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.91□□□□□ -0.5
Cd40lgP27548 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.9□□□□□ -0.5
Cd40lgP27548 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cd40lgP27548 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.9□□□□□ -0.5
Cd40lgP27548 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cd40lgP27548 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cd40lgP27548 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms