Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp6P0C0A3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Gm6458-201ENSMUST00000211573 635 ntBASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp6P0C0A3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp6P0C0A3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp6P0C0A3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms