Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.2□□□□□ -0.46
ApoeP08226 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
ApoeP08226 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ApoeP08226 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ApoeP08226 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ApoeP08226 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ApoeP08226 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ApoeP08226 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.19□□□□□ -0.46
ApoeP08226 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ApoeP08226 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ApoeP08226 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Gm11524-201ENSMUST00000119349 807 ntBASIC12.19□□□□□ -0.46
ApoeP08226 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.19□□□□□ -0.46
ApoeP08226 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.19□□□□□ -0.46
ApoeP08226 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.19□□□□□ -0.46
ApoeP08226 Gm19078-201ENSMUST00000206311 727 ntBASIC12.19□□□□□ -0.46
ApoeP08226 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ApoeP08226 Gm7775-201ENSMUST00000218871 853 ntBASIC12.19□□□□□ -0.46
ApoeP08226 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.19□□□□□ -0.46
ApoeP08226 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ApoeP08226 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ApoeP08226 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.18□□□□□ -0.46
ApoeP08226 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ApoeP08226 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.18□□□□□ -0.46
ApoeP08226 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.18□□□□□ -0.46
ApoeP08226 Gm15376-201ENSMUST00000122258 783 ntBASIC12.18□□□□□ -0.46
ApoeP08226 Gm11978-201ENSMUST00000122315 466 ntBASIC12.18□□□□□ -0.46
ApoeP08226 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.18□□□□□ -0.46
ApoeP08226 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ApoeP08226 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ApoeP08226 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Gm38294-201ENSMUST00000192831 381 ntBASIC12.18□□□□□ -0.46
ApoeP08226 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.18□□□□□ -0.46
ApoeP08226 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.18□□□□□ -0.46
ApoeP08226 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.18□□□□□ -0.46
ApoeP08226 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ApoeP08226 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.18□□□□□ -0.46
ApoeP08226 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
ApoeP08226 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ApoeP08226 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ApoeP08226 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ApoeP08226 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
ApoeP08226 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ApoeP08226 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ApoeP08226 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.17□□□□□ -0.46
ApoeP08226 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
ApoeP08226 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ApoeP08226 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.17□□□□□ -0.46
ApoeP08226 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.17□□□□□ -0.46
ApoeP08226 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms