Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Gm12363-201ENSMUST00000122250 668 ntBASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Gm27847-201ENSMUST00000183711 107 ntBASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Gm27375-201ENSMUST00000183799 107 ntBASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Gm27839-201ENSMUST00000184242 106 ntBASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Gm7653-201ENSMUST00000214567 508 ntBASIC11.12□□□□□ -0.63
Igh-VJ558P01758 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Gm32025-201ENSMUST00000217960 307 ntBASIC11.12□□□□□ -0.63
Igh-VJ558P01758 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igh-VJ558P01758 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Gm4768-201ENSMUST00000206199 686 ntBASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Gm26035-201ENSMUST00000083065 308 ntBASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igh-VJ558P01758 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.1□□□□□ -0.63
Igh-VJ558P01758 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms