Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Hdac1O09106 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Hdac1O09106 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Hdac1O09106 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.3■□□□□ 0.04
Hdac1O09106 Gm14760-201ENSMUST00000121831 999 ntBASIC15.3■□□□□ 0.04
Hdac1O09106 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.3■□□□□ 0.04
Hdac1O09106 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.3■□□□□ 0.04
Hdac1O09106 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Hdac1O09106 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hdac1O09106 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.3■□□□□ 0.04
Hdac1O09106 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.3■□□□□ 0.04
Hdac1O09106 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC15.3■□□□□ 0.04
Hdac1O09106 Gm20949-201ENSMUST00000206478 952 ntBASIC15.3■□□□□ 0.04
Hdac1O09106 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.3■□□□□ 0.04
Hdac1O09106 Gm6218-201ENSMUST00000219812 628 ntBASIC15.3■□□□□ 0.04
Hdac1O09106 Gm18473-201ENSMUST00000220543 868 ntBASIC15.3■□□□□ 0.04
Hdac1O09106 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hdac1O09106 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hdac1O09106 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.3■□□□□ 0.04
Hdac1O09106 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac1O09106 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.29■□□□□ 0.04
Hdac1O09106 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Hdac1O09106 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Hdac1O09106 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hdac1O09106 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.29■□□□□ 0.04
Hdac1O09106 Gm6152-201ENSMUST00000151704 340 ntBASIC15.29■□□□□ 0.04
Hdac1O09106 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Gm28631-201ENSMUST00000190740 334 ntBASIC15.29■□□□□ 0.04
Hdac1O09106 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.29■□□□□ 0.04
Hdac1O09106 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.29■□□□□ 0.04
Hdac1O09106 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.29■□□□□ 0.04
Hdac1O09106 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Hdac1O09106 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hdac1O09106 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac1O09106 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Gm15429-201ENSMUST00000151268 798 ntBASIC15.28■□□□□ 0.04
Hdac1O09106 Gm7063-201ENSMUST00000186840 981 ntBASIC15.28■□□□□ 0.04
Hdac1O09106 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 Gm5867-201ENSMUST00000063197 592 ntBASIC15.28■□□□□ 0.04
Hdac1O09106 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hdac1O09106 Gm43051-201ENSMUST00000201096 2678 ntBASIC15.28■□□□□ 0.04
Hdac1O09106 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hdac1O09106 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hdac1O09106 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hdac1O09106 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hdac1O09106 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hdac1O09106 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hdac1O09106 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hdac1O09106 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hdac1O09106 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms