Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.39□□□□□ -0.27
Ebf3O08791 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf3O08791 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf3O08791 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ebf3O08791 Gm18584-201ENSMUST00000203098 964 ntBASIC13.39□□□□□ -0.27
Ebf3O08791 Gm6458-201ENSMUST00000211573 635 ntBASIC13.39□□□□□ -0.27
Ebf3O08791 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ebf3O08791 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ebf3O08791 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ebf3O08791 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ebf3O08791 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.39□□□□□ -0.27
Ebf3O08791 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Ebf3O08791 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ebf3O08791 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ebf3O08791 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.38□□□□□ -0.27
Ebf3O08791 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.38□□□□□ -0.27
Ebf3O08791 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.38□□□□□ -0.27
Ebf3O08791 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.38□□□□□ -0.27
Ebf3O08791 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm20482-202ENSMUST00000174729 825 ntBASIC13.38□□□□□ -0.27
Ebf3O08791 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.38□□□□□ -0.27
Ebf3O08791 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ebf3O08791 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.38□□□□□ -0.27
Ebf3O08791 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.38□□□□□ -0.27
Ebf3O08791 Mir433-201ENSMUST00000093564 124 ntBASIC13.38□□□□□ -0.27
Ebf3O08791 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.38□□□□□ -0.27
Ebf3O08791 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ebf3O08791 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ebf3O08791 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ebf3O08791 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.38□□□□□ -0.27
Ebf3O08791 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ebf3O08791 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ebf3O08791 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.38□□□□□ -0.27
Ebf3O08791 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf3O08791 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.37□□□□□ -0.27
Ebf3O08791 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ebf3O08791 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Ebf3O08791 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ebf3O08791 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ebf3O08791 Gm5781-201ENSMUST00000219792 443 ntBASIC13.37□□□□□ -0.27
Ebf3O08791 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.37□□□□□ -0.27
Ebf3O08791 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf3O08791 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms