Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc180J3QNE4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC23.1■■□□□ 1.29
Ccdc180J3QNE4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
Ccdc180J3QNE4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Ccdc180J3QNE4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc180J3QNE4 Gm43858-201ENSMUST00000199418 1778 ntBASIC23.1■■□□□ 1.29
Ccdc180J3QNE4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Gm10179-201ENSMUST00000086233 688 ntBASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC23.09■■□□□ 1.29
Ccdc180J3QNE4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Gm5525-201ENSMUST00000190438 1312 ntBASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Mir7686-201ENSMUST00000200604 57 ntBASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC23.08■■□□□ 1.29
Ccdc180J3QNE4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ccdc180J3QNE4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC23.08■■□□□ 1.28
Ccdc180J3QNE4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC23.08■■□□□ 1.28
Ccdc180J3QNE4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ccdc180J3QNE4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ccdc180J3QNE4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ccdc180J3QNE4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ccdc180J3QNE4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Gm27530-201ENSMUST00000184096 98 ntBASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Gm43916-201ENSMUST00000205062 967 ntBASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Gm45909-201ENSMUST00000212413 1031 ntBASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc180J3QNE4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Gm8199-201ENSMUST00000121323 823 ntBASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Gm45342-201ENSMUST00000210903 1363 ntBASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc180J3QNE4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Gm44851-201ENSMUST00000205735 2309 ntBASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC23.05■■□□□ 1.28
Ccdc180J3QNE4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms