Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Acot6-202ENSMUST00000222921 3622 ntBASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.7□□□□□ -0.38
Srp54bE9PXC0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm26956-201ENSMUST00000182176 986 ntBASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Srp54bE9PXC0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm23363-201ENSMUST00000175024 79 ntBASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm29199-201ENSMUST00000187766 775 ntBASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm30285-201ENSMUST00000214614 422 ntBASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.69□□□□□ -0.38
Srp54bE9PXC0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.69□□□□□ -0.38
Srp54bE9PXC0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.68□□□□□ -0.38
Srp54bE9PXC0 Gm14726-201ENSMUST00000120623 896 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms