Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm13296-201ENSMUST00000117854 997 ntBASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm12380-201ENSMUST00000119012 544 ntBASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm23119-201ENSMUST00000158610 140 ntBASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm9022-201ENSMUST00000182482 992 ntBASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm32999-201ENSMUST00000192693 562 ntBASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm4909-201ENSMUST00000118749 794 ntBASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm26361-201ENSMUST00000158868 186 ntBASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3aA2ASI5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Gm18734-201ENSMUST00000172937 808 ntBASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Gm44651-201ENSMUST00000207343 372 ntBASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3aA2ASI5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Gm18041-201ENSMUST00000218210 618 ntBASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3aA2ASI5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms