Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.12□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm22189-201ENSMUST00000103822 86 ntBASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm38223-201ENSMUST00000194484 695 ntBASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm42612-201ENSMUST00000197986 623 ntBASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm43170-201ENSMUST00000199827 612 ntBASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm15376-201ENSMUST00000122258 783 ntBASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm7730-201ENSMUST00000212486 454 ntBASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ighv1-11A0A0A6YWI9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms