Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Mir874-201ENSMUST00000104769 76 ntBASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm6912-201ENSMUST00000117218 544 ntBASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav6n-6A0A075B6B2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Syt7-204ENSMUST00000223586 1344 ntBASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav6n-6A0A075B6B2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms