Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.55□□□□□ -0.72
Trav18A0A075B656 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.55□□□□□ -0.72
Trav18A0A075B656 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.55□□□□□ -0.72
Trav18A0A075B656 Itm2b-204ENSMUST00000228637 783 ntBASIC10.55□□□□□ -0.72
Trav18A0A075B656 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.55□□□□□ -0.72
Trav18A0A075B656 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.55□□□□□ -0.72
Trav18A0A075B656 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.55□□□□□ -0.72
Trav18A0A075B656 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav18A0A075B656 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.54□□□□□ -0.72
Trav18A0A075B656 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm15429-201ENSMUST00000151268 798 ntBASIC10.54□□□□□ -0.72
Trav18A0A075B656 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Mir7654-201ENSMUST00000185082 70 ntBASIC10.54□□□□□ -0.72
Trav18A0A075B656 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.54□□□□□ -0.72
Trav18A0A075B656 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.54□□□□□ -0.72
Trav18A0A075B656 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav18A0A075B656 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms