Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Gm11618-201ENSMUST00000117946 267 ntBASIC12.55□□□□□ -0.4
Cdh17Q9R100 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.55□□□□□ -0.4
Cdh17Q9R100 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.55□□□□□ -0.4
Cdh17Q9R100 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Gm8598-201ENSMUST00000221184 836 ntBASIC12.55□□□□□ -0.4
Cdh17Q9R100 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.55□□□□□ -0.4
Cdh17Q9R100 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.55□□□□□ -0.4
Cdh17Q9R100 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh17Q9R100 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cdh17Q9R100 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.54□□□□□ -0.4
Cdh17Q9R100 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.54□□□□□ -0.4
Cdh17Q9R100 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdh17Q9R100 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.53□□□□□ -0.4
Cdh17Q9R100 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.53□□□□□ -0.4
Cdh17Q9R100 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gm13612-201ENSMUST00000119276 390 ntBASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gm27701-201ENSMUST00000184498 110 ntBASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh17Q9R100 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms