Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.2□□□□□ -0.46
SrfQ9JM73 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm12266-201ENSMUST00000120311 962 ntBASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm22334-201ENSMUST00000158070 133 ntBASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm32999-201ENSMUST00000192693 562 ntBASIC12.2□□□□□ -0.46
SrfQ9JM73 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.2□□□□□ -0.46
SrfQ9JM73 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm19212-201ENSMUST00000216642 862 ntBASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm18730-201ENSMUST00000218038 343 ntBASIC12.2□□□□□ -0.46
SrfQ9JM73 Mir339-201ENSMUST00000083659 96 ntBASIC12.2□□□□□ -0.46
SrfQ9JM73 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.2□□□□□ -0.46
SrfQ9JM73 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SrfQ9JM73 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SrfQ9JM73 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SrfQ9JM73 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm12015-201ENSMUST00000117065 843 ntBASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm13183-201ENSMUST00000118615 789 ntBASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm14999-201ENSMUST00000121039 624 ntBASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm17040-202ENSMUST00000170597 889 ntBASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.19□□□□□ -0.46
SrfQ9JM73 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SrfQ9JM73 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.19□□□□□ -0.46
SrfQ9JM73 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.19□□□□□ -0.46
SrfQ9JM73 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SrfQ9JM73 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SrfQ9JM73 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.19□□□□□ -0.46
SrfQ9JM73 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.19□□□□□ -0.46
SrfQ9JM73 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SrfQ9JM73 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms