Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ube4bQ9ES00 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ube4bQ9ES00 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Gm24158-201ENSMUST00000175263 71 ntBASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Mir7221-201ENSMUST00000184009 72 ntBASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Gm44124-201ENSMUST00000204159 472 ntBASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ube4bQ9ES00 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gm5566-201ENSMUST00000116118 459 ntBASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 AA543401-201ENSMUST00000164248 1269 ntBASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gm27631-201ENSMUST00000184163 466 ntBASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gm18766-201ENSMUST00000189811 808 ntBASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gm18027-201ENSMUST00000218947 619 ntBASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Map1b-203ENSMUST00000223725 2669 ntBASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ube4bQ9ES00 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ube4bQ9ES00 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms