Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gm12485-201ENSMUST00000119641 291 ntBASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gm14767-201ENSMUST00000121559 586 ntBASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gm27430-201ENSMUST00000184585 107 ntBASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gm44333-201ENSMUST00000197168 107 ntBASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chaf1bQ9D0N7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Gm4875-201ENSMUST00000118257 786 ntBASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Gm27321-201ENSMUST00000185021 205 ntBASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.11□□□□□ -0.47
Chaf1bQ9D0N7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.1□□□□□ -0.47
Chaf1bQ9D0N7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms