Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Gm24447-201ENSMUST00000083977 338 ntBASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim13Q9CYB0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Gm27321-201ENSMUST00000185021 205 ntBASIC11.93□□□□□ -0.5
Trim13Q9CYB0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim13Q9CYB0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm27680-201ENSMUST00000184192 160 ntBASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim13Q9CYB0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms