Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Gm44771-201ENSMUST00000206975 626 ntBASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Gm8227-201ENSMUST00000223306 571 ntBASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssu72Q9CY97 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.79□□□□□ -0.36
Ssu72Q9CY97 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ssu72Q9CY97 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ssu72Q9CY97 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms