Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RTRAFQ9CQE8 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
RTRAFQ9CQE8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
RTRAFQ9CQE8 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Gm17971-201ENSMUST00000190239 806 ntBASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 Gm18049-201ENSMUST00000208909 581 ntBASIC10.45□□□□□ -0.74
RTRAFQ9CQE8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms