Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Gm22133-201ENSMUST00000102082 109 ntBASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.77□□□□□ -0.37
Cdh23Q99PF4 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.77□□□□□ -0.37
Cdh23Q99PF4 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Gm8723-201ENSMUST00000166076 820 ntBASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Gm8701-201ENSMUST00000169259 874 ntBASIC12.77□□□□□ -0.37
Cdh23Q99PF4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdh23Q99PF4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Gm45594-201ENSMUST00000211717 241 ntBASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.76□□□□□ -0.37
Cdh23Q99PF4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh23Q99PF4 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm17877-201ENSMUST00000192578 814 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm14724-201ENSMUST00000118400 537 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm11956-201ENSMUST00000119525 512 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm19009-201ENSMUST00000223072 823 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm26448-201ENSMUST00000082446 203 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.75□□□□□ -0.37
Cdh23Q99PF4 Gm12783-201ENSMUST00000121425 397 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms