Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Gm28911-201ENSMUST00000188837 117 ntBASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.82□□□□□ -0.68
H1fooQ8VIK3 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H1fooQ8VIK3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Gm23984-201ENSMUST00000157139 203 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Gm8515-201ENSMUST00000194852 576 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Gm38671-201ENSMUST00000200573 130 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
H1fooQ8VIK3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.8□□□□□ -0.68
H1fooQ8VIK3 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms