Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpap2Q8VC34 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Gm15824-201ENSMUST00000119516 955 ntBASIC14.15□□□□□ -0.14
Rpap2Q8VC34 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Gm32025-201ENSMUST00000217960 307 ntBASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpap2Q8VC34 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rpap2Q8VC34 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpap2Q8VC34 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.13□□□□□ -0.15
Rpap2Q8VC34 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Gm27731-201ENSMUST00000185192 107 ntBASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpap2Q8VC34 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms