Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nup35Q8R4R6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm24513-201ENSMUST00000174964 138 ntBASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.51□□□□□ -0.73
Nup35Q8R4R6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm11524-201ENSMUST00000119349 807 ntBASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm14822-201ENSMUST00000122247 291 ntBASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm15376-201ENSMUST00000122258 783 ntBASIC10.5□□□□□ -0.73
Nup35Q8R4R6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm27397-201ENSMUST00000184997 107 ntBASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm19078-201ENSMUST00000206311 727 ntBASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Gm7775-201ENSMUST00000218871 853 ntBASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup35Q8R4R6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms