Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Mir698-201ENSMUST00000102164 109 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Gm12585-201ENSMUST00000117307 290 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Gm4804-201ENSMUST00000182234 999 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slf1Q8R3P9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.03□□□□□ -0.32
Slf1Q8R3P9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slf1Q8R3P9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.02□□□□□ -0.32
Slf1Q8R3P9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Gm10766-202ENSMUST00000194123 606 ntBASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Gm45841-201ENSMUST00000207700 164 ntBASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Gm7775-201ENSMUST00000218871 853 ntBASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Gm5867-201ENSMUST00000063197 592 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms