Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Gm11618-201ENSMUST00000117946 267 ntBASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cchcr1Q8K2I2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Gm13612-201ENSMUST00000119276 390 ntBASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Gm28911-201ENSMUST00000188837 117 ntBASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Gm38671-201ENSMUST00000200573 130 ntBASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cchcr1Q8K2I2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Gm10576-201ENSMUST00000191927 825 ntBASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cchcr1Q8K2I2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cchcr1Q8K2I2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms