Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rfwd3Q8CIK8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Gm13829-201ENSMUST00000119600 138 ntBASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Gm13123-201ENSMUST00000122173 492 ntBASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Gm29705-201ENSMUST00000212598 474 ntBASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rfwd3Q8CIK8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rfwd3Q8CIK8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Gm6266-201ENSMUST00000203844 806 ntBASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms