Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.58□□□□□ -0.24
Uba3Q8C878 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Uba3Q8C878 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Uba3Q8C878 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.58□□□□□ -0.24
Uba3Q8C878 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.58□□□□□ -0.24
Uba3Q8C878 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.58□□□□□ -0.24
Uba3Q8C878 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Uba3Q8C878 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Uba3Q8C878 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Uba3Q8C878 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.57□□□□□ -0.24
Uba3Q8C878 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Uba3Q8C878 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.57□□□□□ -0.24
Uba3Q8C878 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Uba3Q8C878 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.57□□□□□ -0.24
Uba3Q8C878 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Uba3Q8C878 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.57□□□□□ -0.24
Uba3Q8C878 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.57□□□□□ -0.24
Uba3Q8C878 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.57□□□□□ -0.24
Uba3Q8C878 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.57□□□□□ -0.24
Uba3Q8C878 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Uba3Q8C878 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.57□□□□□ -0.24
Uba3Q8C878 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Uba3Q8C878 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Uba3Q8C878 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Uba3Q8C878 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Uba3Q8C878 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.56□□□□□ -0.24
Uba3Q8C878 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Snord83b-201ENSMUST00000104546 94 ntBASIC13.56□□□□□ -0.24
Uba3Q8C878 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.56□□□□□ -0.24
Uba3Q8C878 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.56□□□□□ -0.24
Uba3Q8C878 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Uba3Q8C878 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Uba3Q8C878 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms